|
Class Summary |
| CutoffCalculator |
A dialog for calculating the cutoff for scoring a genomic sequence. |
| Distance |
|
| GuiTools |
inits the look and feel for all windows |
| MainPanel |
The main panel for the GUI, usable in a frame or window
or in an applett. |
| MainWindow |
The main class for the GUI. |
| MotifCheckTree |
Provides functions for displaying a number of motifs as
a tree (representation is a JTree) within a
JScrollPane. |
| MotifDistanceTree |
Provides functions for displaying a number of motifs and
intermediate distances as a tree. |
| MotifMaker |
Dialog for editing motifs. |
| MotifTree |
Provides functions for displaying a number of motifs as a
tree (representation is a JTree) within a
JScrollPane. |
| MouseOverHintManager |
This class is used, to add a hint for any number of components. |
| ScorePlotBrowser |
Panel for browsing sequences and showing the motifs found. |
| StatusBar |
A status bar is created with at least one and maximal ten labels to
put text into. |
| TextInsertDialog |
A small dialog with TextArea to insert text into. |