de.unibi.techfak.InSilicoDicer.OperatingPackage
Class PrettyPrinter

java.lang.Object
  de.unibi.techfak.InSilicoDicer.OperatingPackage.PrettyPrinter

public class PrettyPrinter
extends java.lang.Object

Author:

Sylvia PrettyPrinter displays the program's output in a pretty way.

Constructor Summary

PrettyPrinter()

Method Summary

static PrettyPrinter	getInstance() Singleton
java.lang.String	printAlign(java.util.Vector pcs, java.util.Vector alignment) Pretty-prints an alignment
java.lang.String	printConservation(java.util.Vector pcs, java.util.Vector alignment, java.util.Vector conservation) Pretty-prints the conservation profile
java.lang.String	printPrecursorContainer(PrecursorContainer pc) Pretty-prints the content of a precursor container
java.lang.String	printScores(java.util.Vector pcs, java.util.Vector scores) Pretty-prints the scores of each Precursor

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PrettyPrinter

public PrettyPrinter()

Method Detail

getInstance

public static PrettyPrinter getInstance()

Singleton

Returns:

PrettyPrinter

printPrecursorContainer

public java.lang.String printPrecursorContainer(PrecursorContainer pc)

Pretty-prints the content of a precursor container

Parameters:

pc -

Returns:

String of selcted precursors

printAlign

public java.lang.String printAlign(java.util.Vector pcs,
                                   java.util.Vector alignment)

Pretty-prints an alignment

Parameters:

pcs -

alignment -

Returns:

String of Alignment

printConservation

public java.lang.String printConservation(java.util.Vector pcs,
                                          java.util.Vector alignment,
                                          java.util.Vector conservation)

Pretty-prints the conservation profile

Parameters:

pcs -

alignment -

conservation -

Returns:

String of Conservation profile

printScores

public java.lang.String printScores(java.util.Vector pcs,
                                    java.util.Vector scores)

Pretty-prints the scores of each Precursor

Parameters:

pcs -

scores -

Returns:

String of scoring