de.unibi.techfak.InSilicoDicer.OperatingPackage
Class Precursor

java.lang.Object
  de.unibi.techfak.InSilicoDicer.OperatingPackage.Precursor

All Implemented Interfaces:

java.io.Serializable

public class Precursor
extends java.lang.Object
implements java.io.Serializable

Author:

Sylvia Tippmann Jan Krueger A Precursor object containing id, description, the sequence itself, a similarity value and the secundary structure. TODO: At the moment we believe that all data in the correct format. In future we have to check this!

See Also:

Serialized Form

Field Summary

static long

serialVersionUID

Constructor Summary

Precursor(java.lang.String id, java.lang.String description, java.lang.String sequence)
Constructor : constructs a new Precursor with id, description, sequence

Precursor(java.lang.String id, java.lang.String description, java.lang.String sequence, java.lang.String folding)
Constructor : constructs a Precursor Object with id, description, sequence and folding.

Method Summary

java.lang.String	getDescription()
java.lang.String	getFolding()
java.lang.String	getId()
java.lang.String	getSequence()
int	getSimilarityTo()
void	setDescription(java.lang.String description)
void	setFolding(java.lang.String folding)
void	setId(java.lang.String id)
void	setSequence(java.lang.String sequence)
void	setSimilarityTo(int similarityTo)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

serialVersionUID

public static final long serialVersionUID

See Also:

Constant Field Values

Constructor Detail

Precursor

public Precursor(java.lang.String id,
                 java.lang.String description,
                 java.lang.String sequence,
                 java.lang.String folding)

Constructor : constructs a Precursor Object with id, description, sequence and folding.

Parameters:

id - - id of current Precursor

description - - description of current Precursor

sequence - - sequenceinformation of current Precursor

folding - - secundary structure (dot bracket) of current Precursor

Precursor

public Precursor(java.lang.String id,
                 java.lang.String description,
                 java.lang.String sequence)

Constructor : constructs a new Precursor with id, description, sequence

Parameters:

id -

description -

sequence -

Method Detail

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

getDescription

public java.lang.String getDescription()

Returns:

Returns the description.

setDescription

public void setDescription(java.lang.String description)

Parameters:

description - The description to set.

getSequence

public java.lang.String getSequence()

Returns:

Returns the sequence.

setSequence

public void setSequence(java.lang.String sequence)

Parameters:

sequence - The sequence to set.

getId

public java.lang.String getId()

Returns:

Returns the id.

setId

public void setId(java.lang.String id)

Parameters:

id - The id to set.

getFolding

public java.lang.String getFolding()

Returns:

Returns the folding.

setFolding

public void setFolding(java.lang.String folding)

Parameters:

folding - The folding to set.

getSimilarityTo

public int getSimilarityTo()

Returns:

Returns the similarityTo.

setSimilarityTo

public void setSimilarityTo(int similarityTo)

Parameters:

similarityTo - The similarityTo to set.