Uses of Interface
de.unibi.techfak.InSilicoDicer.Actions.Action

Packages that use Action

de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors
de.unibi.techfak.InSilicoDicer.Actions.CalcConservation
de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor
de.unibi.techfak.InSilicoDicer.Actions.ScorePrecursor

Uses of Action in de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors

Subinterfaces of Action in de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors

interface

IMultipleAlignAction

Classes in de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors that implement Action

class	ClustalWWS Implementation of interface IFoldingAction, which uses RNAfold as webservice running on BiBiServ
class	MA_ClustalW Implementation of interface IMultipleAlignAction implements an alignments class using a locally installed clustalw tool.

Uses of Action in de.unibi.techfak.InSilicoDicer.Actions.CalcConservation

Subinterfaces of Action in de.unibi.techfak.InSilicoDicer.Actions.CalcConservation

interface

ICalcConservationAction

Classes in de.unibi.techfak.InSilicoDicer.Actions.CalcConservation that implement Action

class	CalcCons_Entropy
class	CalcCons_Entropy_seed

Uses of Action in de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor

Subinterfaces of Action in de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor

interface

IFoldingAction

Classes in de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor that implement Action

class	Fold_Vienna Implementation of interface IFoldingAction, used RNAfold (locally) from Vienna package to support folding.
class	RNAfoldWS Implementation of interface IFoldingAction, which uses RNAfold as webservice running on BiBiServ

Uses of Action in de.unibi.techfak.InSilicoDicer.Actions.ScorePrecursor

Subinterfaces of Action in de.unibi.techfak.InSilicoDicer.Actions.ScorePrecursor

interface

IScoreAction

Classes in de.unibi.techfak.InSilicoDicer.Actions.ScorePrecursor that implement Action

class

Score_Gaasterland