Buildfile: build.xml

compile:
    [mkdir] Created dir: /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes
    [javac] Compiling 35 source files to /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/Action.java]
    [javac] [parsing completed 63ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/AlignPrecursors/ClustalWWS.java]
    [javac] [parsing completed 15ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/AlignPrecursors/IMultipleAlignAction.java]
    [javac] [parsing completed 3ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/AlignPrecursors/MA_ClustalW.java]
    [javac] [parsing completed 19ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/CalcConservation/CalcCons_Entropy.java]
    [javac] [parsing completed 24ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/CalcConservation/CalcCons_Entropy_seed.java]
    [javac] [parsing completed 4ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/CalcConservation/ICalcConservationAction.java]
    [javac] [parsing completed 1ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/FoldPrecursor/Fold_Vienna.java]
    [javac] [parsing completed 4ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/FoldPrecursor/IFoldingAction.java]
    [javac] [parsing completed 1ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/FoldPrecursor/RNAfoldWS.java]
    [javac] [parsing completed 7ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/ScoreAlign.java]
    [javac] [parsing completed 2ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/ScorePrecursor/IScoreAction.java]
    [javac] [parsing completed 3ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/ScorePrecursor/Score_Gaasterland.java]
    [javac] [parsing completed 7ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/Smoother.java]
    [javac] [parsing completed 2ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/Actions/Status.java]
    [javac] [parsing completed 3ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/ISD.java]
    [javac] [parsing completed 24ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler.java]
    [javac] [parsing completed 25ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/InfoFrame.java]
    [javac] [parsing completed 1ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/MenuHandler.java]
    [javac] [parsing completed 34ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/OptionFrame.java]
    [javac] [parsing completed 6ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/OptionHandler.java]
    [javac] [parsing completed 3ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/Plot.java]
    [javac] [parsing completed 7ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/SimilarListModel.java]
    [javac] [parsing completed 2ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/SplashFrame.java]
    [javac] [parsing completed 1ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/GUI/StatusFrame.java]
    [javac] [parsing completed 2ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/Evaluation.java]
    [javac] [parsing completed 32ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/Operator.java]
    [javac] [parsing completed 13ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/Precursor.java]
    [javac] [parsing completed 1ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/PrecursorContainer.java]
    [javac] [parsing completed 8ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/PrettyPrinter.java]
    [javac] [parsing completed 5ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchByName/BMi.java]
    [javac] [parsing completed 3ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchByName/IPatternMatching.java]
    [javac] [parsing completed 1ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchBySequence/ILocalAlign.java]
    [javac] [parsing completed 0ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchBySequence/SWalign.java]
    [javac] [parsing completed 3ms]
    [javac] [parsing started /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src/de/unibi/techfak/InSilicoDicer/OperatingPackage/Start_ISD.java]
    [javac] [parsing completed 5ms]
    [javac] [search path for source files: [/amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/src]]
    [javac] [search path for class files: [/amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/jsse.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/jce.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/charsets.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/sunjce_provider.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/sunpkcs11.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/dnsns.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/jai_core.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/localedata.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/jai_codec.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/mlibwrapper_jai.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/jai_imageio.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/ext/clibwrapper_jiio.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/activation.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/commons-discovery.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/commons-logging.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/jaxrpc.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/log4j-1.2.8.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/mail.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/saaj.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/wsdl4j.jar, /vol/java/share/ant/1.6.5/ant-launcher.jar, /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer, /vol/pi/share/java/activation.jar, /vol/pi/share/java/axis-ant.jar, /vol/pi/share/java/axis.jar, /vol/pi/share/java/bibiwss.jar, /vol/pi/share/java/biodom.jar, /vol/pi/share/java/catalina-ant.jar, /vol/pi/share/java/commons-discovery-0.2.jar, /vol/pi/share/java/commons-discovery.jar, /vol/pi/share/java/commons-logging-1.0.4.jar, /vol/pi/share/java/commons-logging.jar, /vol/pi/share/java/getopt-1.11.jar, /vol/pi/share/java/jaxrpc.jar, /vol/pi/share/java/jdrmaa.jar, /vol/pi/share/java/jgraph.jar, /vol/pi/share/java/jgrapht-0.6.0.jar, /vol/pi/share/java/junit.jar, /vol/pi/share/java/log4j-1.2.12.jar, /vol/pi/share/java/log4j-1.2.8.jar, /vol/pi/share/java/mail.jar, /vol/pi/share/java/postgresql.jar, /vol/pi/share/java/resolver.jar, /vol/pi/share/java/saaj.jar, /vol/pi/share/java/vmatchTools-0.2.jar, /vol/pi/share/java/wsdl4j-1.5.1.jar, /vol/pi/share/java/wsdl4j.jar, /vol/pi/share/java/xercesImpl.jar, /vol/pi/share/java/xercesSamples.jar, /vol/pi/share/java/xml-apis.jar, /vol/java/share/ant/1.6.5/ant-antlr.jar, /vol/java/share/ant/1.6.5/ant-apache-bcel.jar, /vol/java/share/ant/1.6.5/ant-apache-bsf.jar, /vol/java/share/ant/1.6.5/ant-apache-log4j.jar, /vol/java/share/ant/1.6.5/ant-apache-oro.jar, /vol/java/share/ant/1.6.5/ant-apache-regexp.jar, /vol/java/share/ant/1.6.5/ant-apache-resolver.jar, /vol/java/share/ant/1.6.5/ant-commons-logging.jar, /vol/java/share/ant/1.6.5/ant-commons-net.jar, /vol/java/share/ant/1.6.5/ant-icontract.jar, /vol/java/share/ant/1.6.5/ant-jai.jar, /vol/java/share/ant/1.6.5/ant-javamail.jar, /vol/java/share/ant/1.6.5/ant-jdepend.jar, /vol/java/share/ant/1.6.5/ant-jmf.jar, /vol/java/share/ant/1.6.5/ant-jsch.jar, /vol/java/share/ant/1.6.5/ant-junit.jar, /vol/java/share/ant/1.6.5/ant-netrexx.jar, /vol/java/share/ant/1.6.5/ant-nodeps.jar, /vol/java/share/ant/1.6.5/ant-starteam.jar, /vol/java/share/ant/1.6.5/ant-stylebook.jar, /vol/java/share/ant/1.6.5/ant-swing.jar, /vol/java/share/ant/1.6.5/ant-trax.jar, /vol/java/share/ant/1.6.5/ant-vaj.jar, /vol/java/share/ant/1.6.5/ant-weblogic.jar, /vol/java/share/ant/1.6.5/ant-xalan1.jar, /vol/java/share/ant/1.6.5/ant-xslp.jar, /vol/java/share/ant/1.6.5/ant.jar, /vol/java/share/ant/1.6.5/xercesImpl.jar, /vol/java/share/ant/1.6.5/xml-apis.jar, /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/lib/tools.jar]]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Object.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Cloneable.class)]
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    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/jaxrpc.jar(javax/xml/rpc/ParameterMode.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/jaxrpc.jar(javax/xml/rpc/ServiceException.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/AxisFault.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/client/Call.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/client/Service.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/log4j-1.2.8.jar(org/apache/log4j/Logger.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(org/w3c/dom/Element.class)]
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    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/MouseAdapter.class)]
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    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/WindowAdapter.class)]
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    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JButton.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JComboBox.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JComponent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JFrame.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JInternalFrame.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JLabel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JList.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JMenu.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JMenuBar.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JMenuItem.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JOptionPane.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JPanel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JScrollPane.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JSpinner.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JSplitPane.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JTabbedPane.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JTextArea.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JToolBar.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JTree.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/SpinnerNumberModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/event/CaretEvent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/event/CaretListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/event/ListSelectionEvent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/event/ListSelectionListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/tree/DefaultMutableTreeNode.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/tree/DefaultTreeModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/tree/TreePath.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/accessibility/Accessible.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Container.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Component.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/image/ImageObserver.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/MenuContainer.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Cursor.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/ActionEvent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/ActionListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JFileChooser.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JProgressBar.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/tree/TreeNode.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/EventListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/ListModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/event/ListDataEvent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/event/ListDataListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/WindowConstants.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/RootPaneContainer.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Frame.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Window.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Runnable.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Font.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Color.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JCheckBox.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/border/MatteBorder.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Graphics.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JApplet.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JSeparator.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/applet/Applet.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Panel.class)]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.Action]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/Action.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.Status]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/StringBuilder.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/AbstractStringBuilder.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/CharSequence.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Comparable.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/StringBuffer.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/CloneNotSupportedException.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/Status.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors.ClustalWWS]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Class.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/log4j-1.2.8.jar(org/apache/log4j/Category.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/jaxrpc.jar(javax/xml/rpc/Call.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/description/OperationDesc.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/message/RPCElement.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/message/SOAPEnvelope.class)]
    [javac] [loading /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/lib/axis_1.3.jar(org/apache/axis/Message.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Thread.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/InterruptedException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Exception.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Throwable.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(org/w3c/dom/Node.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Integer.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Number.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Error.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/RuntimeException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(org/w3c/dom/DOMException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/NumberFormatException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/IllegalArgumentException.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/AlignPrecursors/ClustalWWS.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors.IMultipleAlignAction]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/AlignPrecursors/IMultipleAlignAction.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.PrecursorContainer]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/Enumeration.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/ListIterator.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/Reader.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/regex/Matcher.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/PrecursorContainer.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.Precursor]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/Precursor.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.Operator]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/Map.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/Dictionary.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/FileDescriptor.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/System.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/NullPointerException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/OutputStream.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/InstantiationException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/IllegalAccessException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/ClassNotFoundException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/zip/InflaterInputStream.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/FilterInputStream.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/FileNotFoundException.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/Operator.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.SearchMethods.SearchBySequence.ILocalAlign]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchBySequence/ILocalAlign.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.SearchMethods.SearchByName.IPatternMatching]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchByName/IPatternMatching.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.CalcConservation.ICalcConservationAction]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/CalcConservation/ICalcConservationAction.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor.IFoldingAction]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/FoldPrecursor/IFoldingAction.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.ScorePrecursor.IScoreAction]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/ScorePrecursor/IScoreAction.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.AlignPrecursors.MA_ClustalW]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/net/URI.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/nio/CharBuffer.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/OutputStreamWriter.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/Writer.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Process.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Runtime.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/AlignPrecursors/MA_ClustalW.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.CalcConservation.CalcCons_Entropy]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/FilterOutputStream.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Math.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/CalcConservation/CalcCons_Entropy.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.CalcConservation.CalcCons_Entropy_seed]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/CalcConservation/CalcCons_Entropy_seed.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor.Fold_Vienna]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/FoldPrecursor/Fold_Vienna.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.FoldPrecursor.RNAfoldWS]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/FoldPrecursor/RNAfoldWS.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.ScoreAlign]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/ScoreAlign.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.ScorePrecursor.Score_Gaasterland]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/ScorePrecursor/Score_Gaasterland.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.Actions.Smoother]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/Actions/Smoother.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.ISD]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/MenuComponent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/LayoutManager.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/LayoutManager2.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/PopupMenu.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/Icon.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/Action.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/SwingConstants.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/ComboBoxModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/geom/Dimension2D.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/border/Border.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/AbstractButton.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/text/JTextComponent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/ScrollPaneConstants.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/AbstractSpinnerModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/SpinnerModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/tree/MutableTreeNode.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/tree/TreeModel.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/MouseListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/GraphicsConfiguration.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Point.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/WindowListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/WindowStateListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/event/WindowFocusListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/ItemSelectable.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/MenuElement.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/SwingUtilities.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/HeadlessException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/UnsupportedOperationException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Rectangle.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/KeyStroke.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/plaf/PanelUI.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/plaf/ComponentUI.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/beans/PropertyChangeListener.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/Set.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/io/PrintWriter.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD$1.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD$2.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD$3.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD$4.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD$5.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD$6.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISD.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.ISDHandler]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/AWTEvent.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/EventObject.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/ThreadGroup.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$1.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$2.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$3.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$4.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$5.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$6.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler$7.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/ISDHandler.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.SimilarListModel]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/SimilarListModel.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.StatusFrame]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/SecurityException.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/util/ResourceBundle.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/StatusFrame.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.InfoFrame]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/InfoFrame.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.MenuHandler]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/MenuHandler.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.OptionFrame]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/JToggleButton.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Paint.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Transparency.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/border/EmptyBorder.class)]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(javax/swing/border/AbstractBorder.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/OptionFrame.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.OptionHandler]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/OptionHandler.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.Plot]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/text/AttributedCharacterIterator.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/Plot.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.GUI.SplashFrame]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/awt/Image.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/SplashFrame$1.class]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/GUI/SplashFrame.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.Evaluation]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/Evaluation.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.PrettyPrinter]
    [javac] [loading /amnt/figaro/volumes/stud03/jdk-1.5.0.sol86/jre/lib/rt.jar(java/lang/Double.class)]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/PrettyPrinter.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.SearchMethods.SearchByName.BMi]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchByName/BMi.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.SearchMethods.SearchBySequence.SWalign]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/SearchMethods/SearchBySequence/SWalign.class]
    [javac] [checking de.unibi.techfak.InSilicoDicer.OperatingPackage.Start_ISD]
    [javac] [wrote /amnt/eiche/volumes/pi09/bibidev/insilicodicer/vol/insilicodicer/classes/de/unibi/techfak/InSilicoDicer/OperatingPackage/Start_ISD.class]
    [javac] [total 6555ms]
    [javac] Note: * uses or overrides a deprecated API.
    [javac] Note: Recompile with -Xlint:deprecation for details.
    [javac] Note: Some input files use unchecked or unsafe operations.
    [javac] Note: Recompile with -Xlint:unchecked for details.

BUILD SUCCESSFUL
Total time: 9 seconds
